Candidozyma auris
CAGCA_007168705.1 · 12.1 Mb · 12 contigs · 5,445 genes
Coverage
Sites with fewer than 5× per-strand reads cannot be called as methylated regardless of signal — same threshold used for the high-confidence sites below. Both strands counted independently.
Cytosines120,465 of 5,477,331 sites
2.2% uncallable
Adenines218,382 of 6,648,055 sites
3.3% uncallable
Methylation summary
High-confidence sites (≥5× coverage, >90% reads modified). Percentages: 5mC/5hmC over 5,477,331 cytosines; 6mA over 6,648,055 adenines (both strands).
5mC0 sites
0% of cytosines
5hmC0 sites
0% of cytosines
6mA1 sites
1.50e-5% of adenines
Densitycombined
8.2e-5sites / kb
Note: from Dorado's 5mC_5hmC basecaller model (distinguishes 5mC, 5hmC, and canonical C in one call) plus a separate 6mA model. 5mC is the primary cytosine methylation in most fungi. Fungi lack TET oxidases, so 5hmC should be essentially absent — any signal above background is an upper bound and may reflect model misclassification.
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